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103 Open 46 Closed
103 Open 46 Closed
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Issues list

out of memory with --preload-size 80GB at 128GB
#171 opened May 16, 2024 by JochenSchaefergmxde
3
krakenuniq-extract-reads error
#168 opened Apr 3, 2024 by km-2021
3
Viral neighbors download (Died)
#167 opened Mar 21, 2024 by jalalsiddiqui
1
Mapping errors when downloading files
#166 opened Mar 19, 2024 by jalalsiddiqui
Trouble downloading viral neighbors database
#165 opened Mar 18, 2024 by jalalsiddiqui
2
krakenuniq-build error and krakenuniq results are unclassified
#164 opened Feb 29, 2024 by QuietgraceH
Clarification on hierarchical read classification with multiple databases
#161 opened Jan 10, 2024 by gtonkinhill
2
Can't use k of 39 (must be <= 31)
#160 opened Jan 9, 2024 by ailtonpcf
1
Metagenomic software solving similar problems as krakenUniq
#159 opened Dec 23, 2023 by pfeiferd
A very long runnig time for krakenuniq
#158 opened Dec 11, 2023 by Sheerlik
2
preload-size error exits with code 0
#156 opened Dec 6, 2023 by jvolkening
krakenuniq-build error
#155 opened Dec 5, 2023 by Sheerlik
6
Non-NCBI TaxIDs -- Mapping to NCBI?
#154 opened Nov 29, 2023 by valiantseal
running time too long
#153 opened Nov 8, 2023 by nsuarezg
4
Timing out with pre-loading of chunked database
#152 opened Oct 27, 2023 by apredeus
3
How do I download species-specific sequences from nt Database ？
#151 opened Sep 15, 2023 by wa123219
Error! Didn't find taxonomy ID mapping for sequence
#150 opened Sep 12, 2023 by gibberwocky
1
Parameters for building the available databases in https://benlangmead.github.io/aws-indexes/k2
#149 opened Aug 24, 2023 by yanchunzhang
Indexes with GTDB [enhancement]
#148 opened Aug 4, 2023 by camilagazolla
Does krakenuniq ever suppress (countable) kmers from reads?
#146 opened Jul 6, 2023 by pfeiferd
5
Blatant miscount of kmers in krakenuniq report file
#145 opened Jun 13, 2023 by pfeiferd
3
empty Reportfile
#143 opened May 28, 2023 by JochenSchaefergmxde
6
krakenuniq-download error
#142 opened May 16, 2023 by sekhwal
1
.sh: 1: dustmasker: not found
#141 opened Apr 27, 2023 by BhawnaY16
1
KrakenUniq (read_merger.pl) fails when using symlinks as input
#140 opened Apr 19, 2023 by boulund
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