Uses k-means prediction to ascertain genomic sequences within ambiguously attributed fasta format data. The resulting cluster sequences are used to develop NCBI BLAST requests.
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Updated
Jun 28, 2023 - Python
Uses k-means prediction to ascertain genomic sequences within ambiguously attributed fasta format data. The resulting cluster sequences are used to develop NCBI BLAST requests.
This is a pipeline for exploring viruses (ssDNA, dsDNA phage, and giant DNA viruses) and viral diversity in metagenomes.
This repository contains the data and scripts used in Simulation Study of Viral Contiguous Sequence Identification Tools
Data portal and API for Center for Viral Systems Biology (CViSB) data
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