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WrightonLabCSU

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@thewrightonlab

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DRAM DRAM Public

Distilled and Refined Annotation of Metabolism: A tool for the annotation and curation of function for microbial and viral genomes

Python 235 48
join_asvbins join_asvbins Public

Python 2
columbia_river columbia_river Public

GitHub Repository of code used for the publication titled: Genome-resolved metaproteomics decodes the microbial and viral contributions to coupled carbon and nitrogen cycling in river sediments

Python 1

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Showing 10 of 13 repositories

DRAM2 Public
Distilled and Refined Annotation of Metabolism: A tool for the annotation and curation of function for microbial and viral genomes

Python 6 0 0 0 Updated May 15, 2024
Protpipeliner Public
This script combines MUSCLE, GBLOCKS, Prottest and RaxML for an efficient and streamlined method of building trees.

Python 1 0 0 0 Updated May 14, 2024
JGI-API-Request Public
Python script is designed to fetch and process genomic data from the Joint Genome Institute (JGI) API, allowing users to request file downloads programmatically based on given taxon IDs.

Python 0 0 0 0 Updated May 13, 2024
CAMPER Public
This is a repository for CAMPER.

Python 6 GPL-3.0 0 1 0 Updated Mar 18, 2024
stordalen_polyphenols_paper Public

HTML 0 0 0 0 Updated Feb 23, 2024
DRAM Public
Distilled and Refined Annotation of Metabolism: A tool for the annotation and curation of function for microbial and viral genomes

Python 235 GPL-3.0 48 74 (2 issues need help) 0 Updated Jan 18, 2024
AD_CERC Public

0 0 0 0 Updated Sep 19, 2023
kb_DRAM Public
A Kbase app for DRAM

Python 1 MIT 1 3 0 Updated Jun 24, 2023
prodigal-recoding Public Forked from hyattpd/Prodigal
Fork of Prodigal Gene Prediction Software to introduce recoding of stop codons

C 1 GPL-3.0 84 0 0 Updated Apr 1, 2023
join_asvbins Public

Python 2 GPL-3.0 0 1 0 Updated Dec 8, 2022

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