Data toolkits for processing NMR, MALDI MSI, MALDI single cell, Raman Spectroscopy, LC-MS and GC-MS raw data, chemoinformatics data analysis and data visualization.
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Updated
Jun 11, 2024 - Visual Basic .NET
Data toolkits for processing NMR, MALDI MSI, MALDI single cell, Raman Spectroscopy, LC-MS and GC-MS raw data, chemoinformatics data analysis and data visualization.
Maven GUI: Metabolomics Analysis and Visualization Engine
Repository for metabolomics and lipidomics data processing app.
Nara Marella
My B.Sc. project involves a collaboration with the M3 Lab Group at SDU. The purpose is to create a Shiny app that will be published. My code will be used in the app to visualize and analysis Metabolomics, Lipidomics data.
Goslin is the Grammar on succinct lipid nomenclature.
Java implementation of the latest shorthand nomenclature.
Python implementation of parsers for the Grammars on succinct lipid nomenclature (Goslin).
C++ implementation of parsers for the Grammars on succinct lipid nomenclature (Goslin).
Data, scripts, and figures for "Homeocurvature adaptation of phospholipids to pressure in deep-sea invertebrates"
Core scripts for FluoroMatch, LipidMatch, and PolyMatch
Biomedicine, Pharma, Life Science, IT Consulting
A software tool for omics-agnostic automated quality control of mass spectrometry data.
Functions and a Shiny app to correct class-based separation LC-MRM-MS lipidomics data for isotopic interferences
LORA: Lipid Over-Representation Analysis
A DMS Shotgun Lipidomics Workflow Application to Facilitate High-Throughput, Comprehensive Lipidomics
Web application and REST Api for parsers for the Grammars on succinct lipid nomenclature (Goslin).
Guide to processing raw LCMS metabolomic and lipidomic data using MS-DIAL, followed by data pre-processing and secondary annotation (of metabolites) in R.
A Deep Learning Framework to Interpret Raw Mass Spectrometry (m/z) Data
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