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58 Open 655 Closed
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Issues list

Differential weight assigned to uploaded spectral libraries enhancement external Request/issue from outside Calico
#726 opened May 22, 2024 by Progress109 2.10.17
@PMSeitzer
2
Diff Iso Search Initial Feedback Action Items high_priority Highest priority, can release as separate milestone. isotopic_labels working_on actively working on this issue
#725 opened May 8, 2024 by PMSeitzer
3 of 6 tasks
2.10.17
@PMSeitzer
4
linux build failing low_priority
#723 opened May 3, 2024 by PMSeitzer
@PMSeitzer
1
Discrepancy between transition list and observed data bug peakdetector specific to peakdetector QQQ triple quad (QQQ) associated
#721 opened May 2, 2024 by PMSeitzer 2.10.17
@PMSeitzer
1
Issue with processing M005B dataset bug not_reproducible
#715 opened Apr 10, 2024 by ngoccalico 2.10.17
@PMSeitzer @ngoccalico
5
MS2-based clustering enhancement
#712 opened Apr 8, 2024 by PMSeitzer 2.10.17
@PMSeitzer
Support encoding Scan m/zs as doubles (instead of floats) enhancement MALDESI MALDESI analysis and processing
#708 opened Mar 22, 2024 by PMSeitzer 2.10.17
@PMSeitzer
Option to transfer, combine properties from peaks properties during merging step enhancement
#687 opened Nov 20, 2023 by PMSeitzer Peak Picking / Grouping Options v2
@PMSeitzer
1
Implement data-specific isotopic refinement options enhancement isotopic_labels
#682 opened Nov 8, 2023 by PMSeitzer
1 of 2 tasks
Isotope_Processor_Future
@PMSeitzer
Support parsing and applying a different value for mergedSmoothingWindow enhancement peakdetector specific to peakdetector stalled On hold
#666 opened Jul 31, 2023 by PMSeitzer
@PMSeitzer
1
On-the-fly agglomeration not working for Display consensus spectra when browsing peakgroups bug gui_only GUI only feature request
#650 opened May 30, 2023 by PMSeitzer
@PMSeitzer
Parallelize lipid Identification step peakdetector specific to peakdetector performance Improve slow performance
#649 opened May 30, 2023 by PMSeitzer
@PMSeitzer
1
Add Dp,norm and p_total_abundance to SECTraceDiff class enhancement SEC Proteomics Associated with SEC Proteomics data and analysis
#645 opened May 22, 2023 by PMSeitzer
@PMSeitzer
Consider both normalized and unnormalized filtering criteria when evaluating trace peaks enhancement SEC Proteomics Associated with SEC Proteomics data and analysis
#644 opened May 22, 2023 by PMSeitzer
@PMSeitzer
Add ability to sort tabledockwidget table based on peakgroup labels enhancement low_priority stalled On hold
#634 opened May 2, 2023 by PMSeitzer
@PMSeitzer
Manual Integration severely under-estimating quant on some QQQ peaks mysterious not_reproducible QQQ triple quad (QQQ) associated
#627 opened Apr 6, 2023 by cmsand
@PMSeitzer
4
Handle partially truncated peaks in EIC::computeBaselineByNonPeakIntensity() bug enhancement QQQ triple quad (QQQ) associated
#618 opened Mar 14, 2023 by PMSeitzer Peak Picking / Grouping Options v2
@PMSeitzer
Support heavy-isotope atom parsing in molecular formulas enhancement working_on actively working on this issue
#616 opened Mar 2, 2023 by PMSeitzer
@PMSeitzer
Update qmake project to use C++17 bug major_refactor Major code refactoring / restructuring associated with this work
#605 opened Jan 20, 2023 by PMSeitzer
@PMSeitzer
1
Possible bug in hard-coded magic constant enhancement
#595 opened Dec 7, 2022 by PMSeitzer
@PMSeitzer
2
Alternative RT calculation for PeakGroup enhancement
#560 opened Jul 27, 2022 by PMSeitzer
@PMSeitzer
Enhance FragmentationMatchScore with additional metrics enhancement stalled On hold
#547 opened Jun 8, 2022 by PMSeitzer
@PMSeitzer
4
Add ability to adjust tag meanings in mzrollDB file enhancement gui_only GUI only feature request stalled On hold
#533 opened Mar 16, 2022 by PMSeitzer
@PMSeitzer @cmsand
3
Handle redundant _M1 compounds during intensity partitioning bug dims DIMS associated stalled On hold
#528 opened Feb 3, 2022 by PMSeitzer Direct Infusion
@PMSeitzer
1
DirectInfusionUtils::findNearestScanNormalizedIntensity(): add last resort of mixing 20 Da and 100 Da scans dims DIMS associated stalled On hold
#521 opened Jan 14, 2022 by PMSeitzer
@PMSeitzer
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