In-silico PCR, primer design and padlock design for in-situ sequencing
-
Updated
Jun 10, 2024 - C++
In-silico PCR, primer design and padlock design for in-situ sequencing
Versatile open-source tool for microbiome analysis
zAMP is a bioinformatic pipeline designed for convenient, reproducible and scalable amplicon-based metagenomics
Reference-based consensus creation
Accurate sample inference from amplicon data with single nucleotide resolution
Automated virus amplicon sequencing analysis program integrated with Nextflow pipeline manager.
Assembly and intrahost/low-frequency variant calling for viral samples
R functions and workflow for submitting amplicon sequence data to the ENA.
A long-read analysis toolbox for cancer and population genomics
A reproducible and scalable workflow for Long Amplicon Consensus Analysis (LACA)
FlexTaxD (Flexible Taxonomy Databases) - Create, add, merge different taxonomy sources (QIIME, GTDB, NCBI and more) and create metagenomic databases (kraken2, ganon and more )
In-silico PCR amplification on complete genomes
Sequence Read Archive Classification
A tool for Nanopore Amplicon Real-Time (NART) analysis.
A pipeline to analyse marine fish amplicon data
A list of R environment based tools for microbiome data exploration, statistical analysis and visualization
Add a description, image, and links to the amplicon topic page so that developers can more easily learn about it.
To associate your repository with the amplicon topic, visit your repo's landing page and select "manage topics."