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v1.1.0 - 09/02/2022

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@andrewdavidsmith andrewdavidsmith released this 03 Sep 02:12
· 77 commits to master since this release

The correct files to download are either falco-1.1.0.zip or falco-1.1.0.tar.gz

Please do not download the "Source code" files automatically generated by github, as they do not contain all files necessary for compilation

New in v1.1.0:

  • Subsampling reads to improve speed for large files

Bugfixes:
#37 : adapter plot now shows range corresponding to max read length
#36 : support for multiple fastq files in a directory
#23 : html report for k-mers had a bug that is fixed

Other changes:

  • modified code so falco can build with older compilers still common on some systems
  • fixing a bug where the output directory was being duplicated if file is within a directory
  • fixing a bug where quiet falco still displayed full progress bar
  • less frequent updates to progress bar make the code faster

The added functionality is the "subsample" option, which uses every k-th read. For large files, this will give the same results (converging at the usual rate), but is faster. Thanks to @y9c for the suggestion (Issue #35).