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v1.3.0

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@andrewdavidsmith andrewdavidsmith released this 09 Aug 23:45
· 407 commits to master since this release
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The correct files to download are dnmtools-1.3.0.tar.gz or dnmtools-1.3.0.zip
Please do not download the "Source code" files. Those are generated by GitHub but lack certain files needed to build DNMTools.

What's Changed

  • The abismal command has been updated to output BAM format directly.
  • Several checks have been added for input data format correctness across commands.
  • Random numbers are controlled across environments for greater reproducibility.
  • The uniq command can now tag each read with its duplicate count.
  • Additional mlml and radmeth documentation.
  • More automated tests available with make check.
  • The states command now can use multiple threads.
  • Several other commands have improved efficiency.

Full Changelog: v1.2.5...v1.3.0