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Fix projection onto NC internal faces #4259

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@hughcars hughcars commented Apr 23, 2024

This PR fixes an error where if a boundary condition is set on an internal boundary with nonconformal refinement, face dofs would not be correctly accounted for on the boundary face. The fix consists of using bdr_faces from the closure method.

Can be seen by setting the field to 0 in ex1p, then project 1 onto the internal boundary (not setting others) using the DividingPlaneMesh mesh used in test_ncmesh.cpp.

Before the fix:
Screenshot 2024-04-23 at 5 30 10 PM

After the fix:
Screenshot 2024-04-23 at 5 30 18 PM

PR Author Editor Reviewers Assignment Approval Merge
#4259 @hughcars @tzanio @psocratis + @dylan-copeland 5/11/24 ⌛due 5/25/24 ⌛due 6/1/24
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@hughcars hughcars marked this pull request as ready for review May 8, 2024 18:39
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tzanio commented May 11, 2024

This PR is now under review (see the table in the PR description). To help with the review process, please do not force push to the branch.

@tzanio tzanio added this to Review Now in Pull Requests via automation May 11, 2024
@tzanio tzanio added this to the mfem-4.8 milestone May 11, 2024
fem/gridfunc.cpp Outdated Show resolved Hide resolved
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@dylan-copeland dylan-copeland self-requested a review May 15, 2024 17:12
- Move unit test to serial code, fix missing one sided NC refinement
- Remove comment debris
@hughcars
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Testing this on ex1p can be done with

diff --git a/examples/ex1p.cpp b/examples/ex1p.cpp
index c3240d621..6d28bd392 100644
--- a/examples/ex1p.cpp
+++ b/examples/ex1p.cpp
@@ -66,6 +66,8 @@
 using namespace std;
 using namespace mfem;
 
+Mesh DividingPlaneMesh(bool tet_mesh, bool split);
+
 int main(int argc, char *argv[])
 {
    // 1. Initialize MPI and HYPRE.
@@ -128,7 +130,30 @@ int main(int argc, char *argv[])
    // 4. Read the (serial) mesh from the given mesh file on all processors.  We
    //    can handle triangular, quadrilateral, tetrahedral, hexahedral, surface
    //    and volume meshes with the same code.
-   Mesh mesh(mesh_file, 1, 1);
+   Mesh mesh = DividingPlaneMesh(false, true); // set first arg to true to have tets
+   mesh.EnsureNCMesh(true);
+   auto OneSidedNCRefine = [](Mesh &mesh)
+   {
+      // Pick one element attached to the new boundary attribute and refine.
+      const auto interface_attr = mesh.bdr_attributes.Max();
+      Array<int> el_to_ref;
+      for (int nbe = 0; nbe < mesh.GetNBE(); nbe++)
+      {
+         if (mesh.GetBdrAttribute(nbe) == interface_attr)
+         {
+            int f, o, e1, e2;
+            mesh.GetBdrElementFace(nbe, &f, &o);
+            mesh.GetFaceElements(f, &e1, &e2);
+            el_to_ref.Append(e1);
+         }
+      }
+      mesh.GeneralRefinement(el_to_ref);
+      return;
+   };
+
+
+
    int dim = mesh.Dimension();
 
    // 5. Refine the serial mesh on all processors to increase the resolution. In
@@ -136,13 +161,15 @@ int main(int argc, char *argv[])
    //    'ref_levels' to be the largest number that gives a final mesh with no
    //    more than 10,000 elements.
    {
-      int ref_levels =
-         (int)floor(log(10000./mesh.GetNE())/log(2.)/dim);
+      int ref_levels = 2;
       for (int l = 0; l < ref_levels; l++)
       {
          mesh.UniformRefinement();
       }
    }
+   OneSidedNCRefine(mesh);
 
    // 6. Define a parallel mesh by a partitioning of the serial mesh. Refine
    //    this mesh further in parallel to increase the resolution. Once the
@@ -150,7 +177,7 @@ int main(int argc, char *argv[])
    ParMesh pmesh(MPI_COMM_WORLD, mesh);
    mesh.Clear();
    {
-      int par_ref_levels = 2;
+      int par_ref_levels = 0;
       for (int l = 0; l < par_ref_levels; l++)
       {
          pmesh.UniformRefinement();
@@ -193,10 +220,11 @@ int main(int argc, char *argv[])
    //    by marking all the boundary attributes from the mesh as essential
    //    (Dirichlet) and converting them to a list of true dofs.
    Array<int> ess_tdof_list;
+   Array<int> ess_bdr(pmesh.bdr_attributes.Max());
    if (pmesh.bdr_attributes.Size())
    {
-      Array<int> ess_bdr(pmesh.bdr_attributes.Max());
-      ess_bdr = 1;
+      ess_bdr = 0;
+      ess_bdr.Last() = 1;
       fespace.GetEssentialTrueDofs(ess_bdr, ess_tdof_list);
    }
 
@@ -214,6 +242,8 @@ int main(int argc, char *argv[])
    ParGridFunction x(&fespace);
    x = 0.0;
 
+   x.ProjectBdrCoefficient(one, ess_bdr);
+
    // 11. Set up the parallel bilinear form a(.,.) on the finite element space
    //     corresponding to the Laplacian operator -Delta, by adding the
    //     Diffusion domain integrator.
@@ -310,3 +340,45 @@ int main(int argc, char *argv[])
 
    return 0;
 }
+
+
+
+
+Mesh DividingPlaneMesh(bool tet_mesh, bool split)
+{
+   auto mesh = Mesh("../../data/ref-cube.mesh");
+   {
+      Array<Refinement> refs;
+      refs.Append(Refinement(0, Refinement::X));
+      mesh.GeneralRefinement(refs);
+   }
+   delete mesh.ncmesh;
+   mesh.ncmesh = nullptr;
+   mesh.FinalizeTopology();
+   mesh.Finalize(true, true);
+
+   mesh.SetAttribute(0, 1);
+   mesh.SetAttribute(1, split ? 2 : 1);
+
+   // Introduce internal boundary elements
+   const int new_attribute = mesh.bdr_attributes.Max() + 1;
+   for (int f = 0; f < mesh.GetNumFaces(); ++f)
+   {
+      int e1, e2;
+      mesh.GetFaceElements(f, &e1, &e2);
+      if (e1 >= 0 && e2 >= 0 && mesh.GetAttribute(e1) != mesh.GetAttribute(e2))
+      {
+         // This is the internal face between attributes.
+         auto *new_elem = mesh.GetFace(f)->Duplicate(&mesh);
+         new_elem->SetAttribute(new_attribute);
+         mesh.AddBdrElement(new_elem);
+      }
+   }
+   if (tet_mesh)
+   {
+      mesh = Mesh::MakeSimplicial(mesh);
+   }
+   mesh.FinalizeTopology();
+   mesh.Finalize(true, true);
+   return mesh;
+}
\ No newline at end of file

then run with mpirun -np 2 ex1p -o 2 which should show the impact on internal boundary projection. Changing the first argument to DividingPlaneMesh to true will give tets and a similar result.


TEST_CASE("InternalBoundaryProjectBdrCoefficient", "[NCMesh]")
{
auto test_project_H1 = [](Mesh &mesh, int order, double coef)
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Extra space after the comma. Does coef need to be nonzero for this test to make sense? If so, this could be in a short comment.

@@ -2811,4 +2811,80 @@ TEST_CASE("RP=I", "[NCMesh]")
}
}


TEST_CASE("InternalBoundaryProjectBdrCoefficient", "[NCMesh]")
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Should there be a parallel test? It seems the issue is fixed in parallel, considering the ex1p test you provided. Do you think the serial test is sufficient, since the changes are only in gridfunc.cpp?

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