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Achievement: StarstruckAchievement: Arctic Code Vault ContributorAchievement: Pull Sharkx2
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@sunbeam-labs
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Pinned

  1. grabseqs grabseqs Public

    A utility for easy downloading of reads from next-gen sequencing repositories like NCBI SRA

    Python 104 16

  2. sunbeam-labs/sunbeam sunbeam-labs/sunbeam Public

    A robust, extensible metagenomics pipeline

    Python 163 39

  3. hisss hisss Public

    Snakemake workflow to download and/or align reads to targets and produce useful outputs.

    Python 4 2

  4. fang-tcga fang-tcga Public

    Snakemake workflow to dump TCGA reads, map to target genomes, and summarize alignments

    Python 1

  5. pyviko pyviko Public

    A web interface & Python tool to design knockouts in viruses with overlapping genes.

    HTML 3

  6. komplexity komplexity Public

    A k-mer-based approach for masking low-complexity nucleotide sequences.

    Go 5 1