Add option to output read classifications in same order as input #47
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Add functionality to load a database catted into a single file instead of from multiple files from a directory. This combination allows the workflow of loading the database from a compressed file or network pipe and processing multiple files while maintaining performance because the file is not implicitly mmap'd and cached implicitly.
Normally the output is in shuffled blocks due to random OpenMP ordering. Use the ordered pragma of OpenMP for ordered output (incurs a performance penalty for synch).
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Normally the output is in shuffled blocks due to random OpenMP ordering. Use the ordered pragma of
OpenMP for ordered output (incurs a performance penalty for synch).