GitHub - wwood/kingfisher-download: Easier download/extract of FASTA/Q read data and metadata from the ENA, NCBI, AWS or GCP.

Welcome

Kingfisher is a fast and flexible program for procurement of sequence files (and their annotations) from public data sources, including the European Nucleotide Archive (ENA), NCBI SRA, Amazon AWS and Google Cloud. It's input is one or more "Run" accessions e.g. DRR001970, or a BioProject accessions e.g. PRJNA621514 or SRP260223.

For more documentation, see https://wwood.github.io/kingfisher-download/

Name		Name	Last commit message	Last commit date
Latest commit History 226 Commits
.github/workflows		.github/workflows
benchmarking @ 08efeca		benchmarking @ 08efeca
bin		bin
docker		docker
docs		docs
images		images
kingfisher		kingfisher
test		test
.gitignore		.gitignore
.gitmodules		.gitmodules
CITATION.cff		CITATION.cff
LICENCE.txt		LICENCE.txt
README.md		README.md
build_docs.py		build_docs.py
doctave.yml		doctave.yml
kingfisher.yml		kingfisher.yml
release.py		release.py
setup.py		setup.py

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wwood/kingfisher-download

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