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24 Open 83 Closed
24 Open 83 Closed
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Issues list

Error using custom PWM
#215 opened Apr 24, 2024 by fmarletaz
An error occurred when I use ananse influence with -w
#211 opened Dec 7, 2023 by socialtree-yt
5
How to construct a network only focusing on my interesting genes?
#210 opened Dec 4, 2023 by socialtree-yt
11
Can I use ananse to compare TFs networks between disease and normal condition such as aging and young ,or fibrosis disease and healthy control?
#209 opened Dec 4, 2023 by socialtree-yt
11
Input X contains NaN
#208 opened Dec 1, 2023 by Roki12543
4
Usage of ANANSE in single-cell multiomic data
#199 opened Dec 7, 2022 by PauBadiaM
3
ananse influence dropping factors with negative logFC
#157 opened Dec 16, 2021 by apposada
1
CRE co-accessibility to link enhancers to gene( promoter)s enhancement New feature or request
#154 opened Nov 26, 2021 by siebrenf
memory usage ananse network
#149 opened Oct 27, 2021 by JGASmits
@JGASmits
Influence.py __init___ & run_influence merge?
#138 opened Sep 29, 2021 by JGASmits
Distance TF-target gene in diff_network output enhancement New feature or request
#128 opened Sep 14, 2021 by JGASmits
@JGASmits
1
make formats the same for network and influence_diffnetwork output enhancement New feature or request
#122 opened Jul 22, 2021 by siebrenf
what to put in the h5 file enhancement New feature or request
#121 opened Jul 22, 2021 by siebrenf
2
Adding peak edges to network -- Add feature request
#111 opened Jul 13, 2021 by mriken
6
dask distributed workers die
#103 opened Jul 5, 2021 by siebrenf
6
ananse network Out Of Memory (OOM) error and killed
#96 opened Jun 16, 2021 by apposada
31
Low and negative motif weights question Further information is requested
#91 opened Jun 15, 2021 by JGASmits
Non-helpfull error region length
#90 opened Jun 15, 2021 by JGASmits
1
A question about general mode in logistic mode
#89 opened Jun 11, 2021 by shangguandong1996
2
Check filtering steps in influence
#61 opened Mar 25, 2021 by simonvh
Ananse influence score for which TFs
#57 opened Mar 22, 2021 by JGASmits
@JGASmits
1
Network annotation file incorrect error
#56 opened Mar 9, 2021 by JGASmits
zenodo changelog parser
#46 opened Feb 22, 2021 by siebrenf
@siebrenf
One thing to consider is maybe sqlite r-tree.
#43 opened Feb 19, 2021 by simonvh
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