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1.1k followers · 13 following

Achievements

Achievement: QuickdrawAchievement: Starstruckx3Achievement: Arctic Code Vault ContributorAchievement: Pull Sharkx3
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Achievements

Achievement: QuickdrawAchievement: Starstruckx3Achievement: Arctic Code Vault ContributorAchievement: Pull Sharkx3
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Organizations

@Victorian-Bioinformatics-Consortium @pha4ge
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Pinned

  1. prokka prokka Public

    ⚡ ♒ Rapid prokaryotic genome annotation

    Perl 760 217

  2. snippy snippy Public

    ✂️ ⚡ Rapid haploid variant calling and core genome alignment

    Perl 439 112

  3. shovill shovill Public

    ⚡♠️ Assemble bacterial isolate genomes from Illumina paired-end reads

    Perl 202 42

  4. abricate abricate Public

    🔎 💊 Mass screening of contigs for antimicrobial and virulence genes

    Perl 337 85

  5. nullarbor nullarbor Public

    💾 📃 "Reads to report" for public health and clinical microbiology

    Perl 130 37

  6. mlst mlst Public

    🆔 Scan contig files against PubMLST typing schemes

    Shell 184 44