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TrackMate

TrackMate is your buddy for everyday tracking.

5 followers
https://imagej.net/plugins/trackmate

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README.md

TrackMate is your buddy for your everyday tracking.

This organization is an architectural layer housing TrackMate and its extensions.
The primary repository is trackmate-sc/TrackMate.
TrackMate is designed for use as a plugin for Fiji.
See also the TrackMate section of the ImageJ wiki.

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TrackMate TrackMate Public

TrackMate is your buddy for your everyday tracking.

Java 149 73
TrackMate-examples TrackMate-examples Public

A simple repository that shows how to extend TrackMate with your own modules.

Java 2 9

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Showing 10 of 17 repositories

TrackMate-Cellpose Public
Tentative Cellpose integration in TrackMate.

Java 4 AGPL-3.0 3 2 0 Updated Jun 5, 2024
TrackMate Public
TrackMate is your buddy for your everyday tracking.

Java 149 GPL-3.0 73 14 7 Updated Jun 5, 2024
TrackMate-Skeleton Public
TrackMate module for skeletonization of tissue end points and tracking

Java 1 GPL-3.0 1 1 1 Updated May 27, 2024
TrackMate-Oneat Public
TrackMate extension for oneat for verifying lineage trees

Java 3 GPL-3.0 0 1 0 Updated May 27, 2024
TrackMate-Weka Public
Using a Weka classifier as detector for TrackMate.

Java 1 GPL-3.0 0 0 1 Updated May 1, 2024
TrackMate-Ilastik Public
Using Ilastik pixel classifiers as detector for TrackMate.

Java 1 GPL-3.0 1 0 1 Updated May 1, 2024
TrackMate-CTCRunner Public
Batch measurements of the Cell-Tracking-Challenge metrics using TrackMate.

Java 1 AGPL-3.0 1 1 0 Updated Apr 4, 2024
TrackMate-StarDist Public
StarDist detection as TrackMate detectors.

Java 7 GPL-3.0 2 3 0 Updated Dec 4, 2023
TrackMate-MorphoLibJ Public
TrackMate detector based on the watershed segmentation tool in the MorphoLibJ plugin.

Java 3 GPL-3.0 0 0 1 Updated Dec 4, 2023
DendriteDynamicsTracker Public
A Fiji plugin to track the dynamics of dendrites in 2D time-lapse movies.

Java 2 BSD-3-Clause 0 0 0 Updated Nov 5, 2023

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