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Sep 19, 2016 - C++
sequence-clustering
Here are 11 public repositories matching this topic...
Dereplicate long sequences
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Mar 25, 2017 - C
CD HIT cluster file parser
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Apr 11, 2018 - Python
Cluster up to millions of peptide sequences on shared sequence motifs.
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Oct 1, 2018 - Java
Code to reproduce the experiments and the proposed visualization from 'Data mining in the development of mHealth apps: assessing in-app navigation through Markov Chain analysis'
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May 8, 2019 - Jupyter Notebook
MeShClust: an intelligent tool for clustering DNA sequences
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Jan 14, 2022 - C++
MeShClust2: Application of alignment-free identity scores in clustering long DNA sequences
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Jan 14, 2022 - C++
This repository contains all the source files required to run DeLUCS, a deep learning clustering algorithm for DNA sequences.
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Aug 31, 2022 - Python
Protein Clustering
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Sep 9, 2022 - Jupyter Notebook
Bioinformatic Tools for analyzing targeted amplicon sequencing developed by Nicholas Hathaway of Bailey Lab
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May 13, 2024 - C++
MMseqs2: ultra fast and sensitive search and clustering suite
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May 23, 2024 - C
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