Amplicon sequencing analysis workflow using DADA2 and QIIME2
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Updated
May 9, 2024 - Nextflow
Amplicon sequencing analysis workflow using DADA2 and QIIME2
Structural variation caller using third generation sequencing
Hifiasm: a haplotype-resolved assembler for accurate Hifi reads
Fast and accurate de novo assembler for long reads
NGMLR is a long-read mapper designed to align PacBio or Oxford Nanopore (standard and ultra-long) to a reference genome with a focus on reads that span structural variations
A high performance and compression ratio compressor for genomic data, powered by GTXLab of Genetalks.
CCS: Generate Highly Accurate Single-Molecule Consensus Reads (HiFi Reads)
Technology agnostic long read analysis pipeline for transcriptomes
Clair3 - Symphonizing pileup and full-alignment for high-performance long-read variant calling
Lima - Demultiplex Barcoded PacBio Samples
Comprehensive TE insertion identification with WGS/WES data from multiple sequencing technics
Correct mismatches, microindels, and noncanonical splice junctions in long reads that have been mapped to the genome
Long-reads Gap-free Chromosome-scale Assembler
An accurate and ultra-fast hybrid genome assembler
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