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365 Open 239 Closed
365 Open 239 Closed
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Issues list

Output that maps repeat shrapnels to unitigs and to scaffolded chromsomes
#662 opened Jun 5, 2024 by gf777
output GFA with J lines in scaffolding mode
#661 opened Jun 5, 2024 by gf777
Numerous spurious contig overlaps in assemblies
#660 opened Jun 5, 2024 by dmacguigan
Issues with Hexaploid Assembly
#659 opened Jun 5, 2024 by BioOmics
No further progress after generating *bin files
#658 opened Jun 3, 2024 by Iven-gif
1
What is the strategy for Ultra-long ONT integration?
#657 opened Jun 3, 2024 by polchan
1
fungi diploid assemble phasing errors
#656 opened May 24, 2024 by Hanjiangna
In the diploid assembly, hfiiasm identified a value that did not exist in the k-mer plot as the "homozygous read coverage threshold".
#655 opened May 24, 2024 by xujialupaoli
Recreate p_ctg from p_utg
#653 opened May 21, 2024 by diego-rt
Read error correction does not reduce the number of kmers present once, twice or three times
#652 opened May 21, 2024 by chklopp
Interchromosomal misjoin
#651 opened May 17, 2024 by Han-Cao
1
Resolving switching error (?)
#650 opened May 14, 2024 by s-kyungyong
*.ovlp.bin file
#649 opened May 8, 2024 by tianjio
1
Switch error on X and Y chromosome
#648 opened May 8, 2024 by Lin-Yuying
2
Spend too long times to run hifiasm
#647 opened May 4, 2024 by hcph
1
Basic Question About HiFi Input
#646 opened May 2, 2024 by foreignsand
3
Empty haplotype 2 gfa files by ONT integration
#645 opened May 2, 2024 by malearimond
1
missing 8Mb sequences in the assembly
#644 opened Apr 29, 2024 by xzhoubayer
5
line 8: 110334 Aborted(core dumped)
#642 opened Apr 29, 2024 by yao-chenxin
1
Is x20 of Hifi data enough to construct draft assembly of 6.5Gb genome?
#640 opened Apr 26, 2024 by Jung19911124
1
discontinuous assembly with shorter pacbio hifi reads but high coverage
#639 opened Apr 17, 2024 by leqi0001
2
In Trio-binning, always more on hap1 despite (almost) same sequences for paternal and maternal
#638 opened Apr 15, 2024 by Magiclexfr
Hifi + Hi-c + ONT assembly fails
#637 opened Apr 12, 2024 by pashapu43
No haploid.gfa files output in trio-binning mode
#636 opened Apr 12, 2024 by tzjingyang
3
Possible missing one haplotype in human assemblies
#635 opened Apr 9, 2024 by woodoo46
2
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