The bridge between the NCBI Gene Expression Omnibus and Bioconductor
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Updated
May 18, 2024 - R
The bridge between the NCBI Gene Expression Omnibus and Bioconductor
Microarray Analysis Pipeline in Python
Subclassification of disease states based on the intersection of literature and expression
analyze_geo_microarrays.py : Differential expression analysis of published microarrays datasets from the NCBI Gene Expression Omnibus (GEO)
A small utility to quickly tag studies and samples from the NCBI Gene Expression Omnibus (GEO) with a curses interface.
Scripts using GEOquery package to fetch expression matrices and phenotypic data associated with GSE datasets
Bioinformatic analysis of gene expression microarray profiles and DGEs on R and R studio
A list of publicly available Microarray Gene Expression datasets with proper attribution and associated toolkits.
My solutions for the project of "An Intro to Bioinformatics" - Sharif University of Technology (SUT) - Prof. Somayyeh Koohi and Prof. Ali Sharifi-Zarchi - Fall 2021(1400-1).
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