Data ingest application for Monarch Initiative knowledge graph using Koza
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Updated
Jun 7, 2024 - Python
Data ingest application for Monarch Initiative knowledge graph using Koza
Mondo Disease Ontology
Ontology Access Kit: A python library and command line application for working with ontologies
source files for OBA (Ontology of Biological Attributes)
LLM-based ontological extraction tools, including SPIRES
An ontology of gross anatomy covering metazoa. Works in concert with https://github.com/obophenotype/cell-ontology
An ontology of cell types
Schema and generated objects for biolink data model and upper ontology
LLM-driven curation assist tool (pre-alpha)
A framework for empirical evaluation of phenotype matching and prioritisation
Medical action ontology
Data transformation framework for LinkML data models
Repository for the GA4GH phenopacket schema
Automated drug repurposing workflow for rare diseases – using Flask, Monarch API, DGIdb API and XGboost.
Ontology for the description of human clinical features
A Tool to Annotate and Prioritize Exome Variants
A format for language profiles for ontologies
EXPERIMENTAL rendering of phenopackets in linkml
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