An ImageJ plugin for intensity-based three-filter set (ratiometric) FRET 🔌
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Updated
Feb 20, 2023 - Java
An ImageJ plugin for intensity-based three-filter set (ratiometric) FRET 🔌
Easily embed annotations in your microscopy images
Open platform for sharing methods, info and data related to multibeam electron microscopy (MB-SEM)
Code for Important Processing Steps For .Tiff or .Raw Video Files Acquired From 2-Photon Imaging System + Completely Automated and With NWB Schema (.HDF5) Capability
SEM image formation process demo tool
A scientific publication, describing a way to improve microscopy. This repository hosts everything you need to reproduce our results. Read the publication here: https://calico.github.io/rescan_line_sted
Deep learning for rotated object detection in Microscopy
Adaptive Optics plugin for MicroManager
Software to process single-molecule and diffraction-limited polarisation camera image data.
Downloads images of histological samples in full quality from Leica's WebScope Flashapplet.
A collection of customised ImageJ macros
Basic toolbox for analysis of in vivo 2-photon data. Originally written at Glenn Turner's lab, CSHL, when I was working with flies.
Live Cell Histology: Extracting latent features from label-free live cell images using Adversarial Autoencoders
WhoIsWho is Google Colab-based tool that aims to classify cells based on features related to their nuclei and their neighbours.
A simple plugin to detect vesicles in cells images.
C.I.T.R.O.N.S - Calcium Imaging Treatment using ROis, Numpy and Scipy
Multiscale Image Restoration for fluorescence microscopy
A Flika plugin. A clone of Insight2 in Python. This can be used to analyze 2D STORM microscopy movies.
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