Super fast script for classifying metagenomic 16S/18S sequences
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Updated
Dec 7, 2017 - Perl
Super fast script for classifying metagenomic 16S/18S sequences
Taller introductorio orientado a la visualización, análisis estadístico y ecológico en R, dirigido al manejo de datos en investigación, e impartido para la PUC durante 2021.
From Waste to Feed | Insect Biotech Research Group
Data from ecological studies about how the climate change drives the microbial community dinamycs in aquatic ecosystems
EukRef PR2
Application of DEMENTpy to a climate gradient in Southern California
Sup. Table 1 from Rodríguez-Gijón and Nuy et al., 2022 (Front. in Microbiology)
Description of the metagenomic pipeline we have for analysis of 16S and 18S amplicon NGS
Scripts for a manuscript titled "Subsurface Microbial Communities Reflect Regional-Scale Groundwater Hydraulic Connectivity" (submitted)
A simple script to detect chimeric sequences in 16S/18S metagenomic samples.
Interactive and evolving catalogue of microbial interactions based on the framework of Pacheco and Segrè (2019)
Microbial co-occurrence network reveals climate and geographic patterns for soil diversity on the planet
BM211 workshop materials
Full-length bacterial 16S rRNA marker genes from a diverse wastewater sample set. LaMartina, et al., ASM Resource Announcement, 2022
QUOR'EM: Query, Update, Organize, and Render 'EM
QIIME 2 and R code along with manifests, metadata, inputs, and outputs for duckweed microbiome project (Acosta et al, 2020, Plos One).
Groundwater bacterial communities evolve over time, exhibiting cyclic similarity patterns in response to multi-annual recharge events
All data and code associated with Welter et al. 2020
R scripts, metadata, input files & reference database
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