#

intrahost

Here are 3 public repositories matching this topic...

PathoGenOmics-Lab / VIPERA

A Snakemake workflow for SARS-CoV-2 Viral Intra-Patient Evolution Reporting and Analysis

bioinformatics snakemake reporting sars-cov-2 virus-evolution intrahost

Updated Apr 17, 2024
Python

chasewnelson / Soni-response

Scripts, analysis code, input data, and intermediate files for response to Soni et al.

diversity evolution slim nucleotide natural-selection nucleotide-diversity covid-19 sars-cov-2 evolutionary-simulation intrahost-genetic-diversity intrahost

Updated Apr 20, 2024
R

NCI-CGR / HPV_low_VAF_SNV_prediction

Predicting true low-VAF SNVs in HPV using triplicate NGS samples and machine learning

machine-learning vcf cancer-genomics variant-calling snv vcf-files ngs-analysis hpv ion-torrent variant-call-format single-nucleotide-variation extreme-gradient-boosting intrahost-genetic-diversity intrahost vcfgenie human-papillomavirus isnv

Updated Mar 12, 2024
Jupyter Notebook

Improve this page

Add a description, image, and links to the intrahost topic page so that developers can more easily learn about it.

Curate this topic

Add this topic to your repo

To associate your repository with the intrahost topic, visit your repo's landing page and select "manage topics."