Projects from Sem 1 MS in Computational Sciences
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Updated
Apr 24, 2021 - HTML
Projects from Sem 1 MS in Computational Sciences
Sequence alignment for bioinformatics
A Python project that was developed as a university assignment for the subject of Bioinformatics.
Uses k-means prediction to ascertain genomic sequences within ambiguously attributed fasta format data. The resulting cluster sequences are used to develop NCBI BLAST requests.
Bioinformatics exercices for basics in python and a bit more advanced concepts in the later folders
Aggregate blast results and/or perform MLST for a set of sample sequences vs a given panel of queries.
Predicting the subcellular location of eukaryotic proteins with support vector machines
Increasing the magnetizability of P. furiosus ferritin using mutations collected from E. coli.
Spring 2021 Machine Learning for Scientists group project
First steps to Bioinformatics by using Biopython tutorial documentation
Python pour les SVT
A project made during my university years. Searching for cis-regulating TFBS on DNA sequences.
Python code to retrieve isoforms from uniprot for Glyconnect.
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