🦠📇 Genomes to report pipeline - for Bacteria and Archaea
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Updated
Jun 7, 2024 - Python
🦠📇 Genomes to report pipeline - for Bacteria and Archaea
🚀 seqfu - Sequece Fastx Utilities
Aggregate results from bioinformatics analyses across many samples into a single report.
A flexible pipeline for complete analysis of bacterial genomes
Cython bindings and Python interface to Prodigal, an ORF finder for genomes and metagenomes. Now with SIMD!
Structural variation caller using third generation sequencing
NGMLR is a long-read mapper designed to align PacBio or Oxford Nanopore (standard and ultra-long) to a reference genome with a focus on reads that span structural variations
Toolset for SV simulation, comparison and filtering
Linux command-line to analyse next-generation sequencing (NGS) data
A beginner’s guide to Bioinformatics
BioContainers Documentation.
Contains scripts to study the impact of publishing software to package management systems on their scholarly recognition.
bacterial strain identification
This project aims do describe and explore the metagenomes of fern species of the genus Azolla.
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