Development medical module software for biobank.
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Updated
Feb 26, 2017 - C#
Development medical module software for biobank.
A deep learning framwork for lung cancer prediction
exploration of TreeWas/TreeWas2 code for the Zaitlen lab. Based on TreeWas developed by McVean Lab @ Oxford.
Command line tool written in c++ for easily extracting light and temperature data from Axivity AX3 accelerometers used in the UKBiobank
This repository provides our generic test protocol for the integration test of ASS.
Multiresponse time-to-event Cox proportional hazards model - GPU
Multiresponse time-to-event Cox proportional hazards model - CPU
ukbREST: efficient and streamlined data access for reproducible research of large biobanks
snpnet - Efficient Lasso Solver for Large-scale genetic variant data
A script that will download meta-data from the UK Biobank website (https://www.ukbiobank.ac.uk).
Inofficial R client for the DSMZ's Bacterial Diversity Metadatabase (former contact: @katrinleinweber). https://api.bacdive.dsmz.de/client_examples seems to be the official alternatives.
An object oriented wrapper and tooling for the OpenSpecimen API, written in Python
An R package to manipulate and explore UK Biobank data
Java Library that implements the Sample PREanalytical Code Version 2 from ISBER
This is the source for the BBMRI.de / GBA Implementation Guide.
LImBuS is an open source, standards compliant Biobank Information Management System developed by researchers from Aberystwyth University.
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