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@rivas-lab

Rivas Lab

Source code and tools for projects in the lab

Popular repositories

  1. covid19 covid19 Public

    As a part of COVID-19 Host Genetics Initiative, we perform the following set of analyses to better understand the genetic basis of COVID-19 susceptibility and severity.

    Jupyter Notebook 42 7

  2. public-resources public-resources Public

    Repository for resources we'd like to share with the community.

    Jupyter Notebook 22 12

  3. snpnet snpnet Public

    snpnet - Efficient Lasso Solver for Large-scale genetic variant data

    R 17 3

  4. mvpmm mvpmm Public

    MultiVariate Polygenic Mixture Model

    R 6 3

  5. FasTag FasTag Public

    FasTag: automatic text classification of unstructured medical narratives

    Jupyter Notebook 5 2

  6. GlobalBiobankEngine GlobalBiobankEngine Public

    A resource for the visualization and exploration of genetic and phenotypic data from biobanks

    HTML 4 2

Repositories

Showing 10 of 35 repositories
  • Jupyter Notebook 0 0 0 0 Updated May 23, 2024
  • AncestryOmicsUKB Public

    Code for the paper: "Using Pre-training and Interaction Modeling for ancestry-specific disease prediction using multiomics data from the UK Biobank"

    R 1 MIT 0 0 0 Updated May 19, 2024
  • snpnet Public

    snpnet - Efficient Lasso Solver for Large-scale genetic variant data

    R 17 3 3 0 Updated Mar 5, 2024
  • mrp Public

    Repo for MRP method.

    Python 3 1 2 2 Updated Jan 13, 2024
  • FasTag Public

    FasTag: automatic text classification of unstructured medical narratives

    Jupyter Notebook 5 2 0 2 Updated Mar 24, 2023
  • GlobalBiobankEngine Public

    A resource for the visualization and exploration of genetic and phenotypic data from biobanks

    HTML 4 MIT 2 13 11 Updated Dec 8, 2022
  • ukbb-tools Public

    Tools for preprocessing, QC, and preliminary analyses from raw UK BioBank data

    Jupyter Notebook 4 0 7 0 Updated Aug 5, 2022
  • PRS Public
    Jupyter Notebook 0 0 6 0 Updated Jun 27, 2022
  • public-resources Public

    Repository for resources we'd like to share with the community.

    Jupyter Notebook 22 MIT 12 5 0 Updated Apr 1, 2022
  • ibd-exomes Public

    All QC, annotation, and analyses for IBD exomes

    Jupyter Notebook 0 0 0 0 Updated Mar 21, 2022