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Bioinformatics and the Linux Terminal

A list of example files to start using the Linux Command Line interface (CLI).

Resources using this repository

📖 Bash tutorial

See the Wiki in this repository.

📆 History

Date Description
2022-10-01 Cleanup and updates (removed legacy files, added scripts)
2019-12-04 Added FASTQ files, Updated README maker with links
2019-12-03 Refactoring the companion website (now using github wiki).
2019-02-20 Readme file generator added (_readme_maker/make_readme)
2018-10-20 Added a "misc" subdirectory with examples taken from another training set
2018-03-05 Package updated, "files" directory added
2018-02-29 First release

💼 Files in the repository

📁 misc 7.4M

This is an extra subdirectory, it contains its own README file for details

📁 archives 16K

Archives to test decompression tools

📁 scripts 72K

📁 phage 4.5M

A set of files to test parsing of bioinformatics format, mostly related to PhiX phage.

📁 files 2.4M

Common file formats, both binary (e.g. PNG image) and text files (e.g. CSV). A PDF document is included to see how less can also handle them.

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