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add indel #46

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add indel #46

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ericloud
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Some modification to manage indel as a specific case of SequenceInsertion or SequenceDeletion.

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Codecov Report

Merging #46 into bloody will decrease coverage by 0.09%.
The diff coverage is 40%.

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@@            Coverage Diff            @@
##           bloody      #46     +/-   ##
=========================================
- Coverage   59.66%   59.57%   -0.1%     
=========================================
  Files          29       29             
  Lines        2737     2748     +11     
=========================================
+ Hits         1633     1637      +4     
- Misses       1104     1111      +7
Impacted Files Coverage Δ
pyGeno/Chromosome.py 79.09% <40%> (-4.25%) ⬇️
pyGeno/SNPFiltering.py 75% <40%> (-0.41%) ⬇️

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@feghalya feghalya changed the base branch from bloody to master September 15, 2021 06:14
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