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17 Open 12 Closed
17 Open 12 Closed
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Issues list

ska fasq vs ska fasta
#31 opened Oct 12, 2023 by luciagrami
SKA Type crashes when no allele is found for a locus
#29 opened Aug 11, 2020 by jrober84
ska distances: adding isolates to databse
#28 opened Jan 10, 2020 by ckhiggs
kmers split by 2 adjacent SNPs for allele-specific primers
#27 opened Dec 12, 2019 by dustinlong
SKA run out of memory on 32 GB VM
#26 opened Nov 26, 2019 by foamy1881
1
unique kmer output
#24 opened Oct 5, 2019 by snafees
1
multithreading
#22 opened Mar 28, 2019 by lskatz
3
Deal with case of 2 or more SNPs within a kmer length enhancement New feature or request
#21 opened Oct 29, 2018 by simonrharris
ska annotate --- generate a multi-sample VCF ? enhancement New feature or request
#20 opened Oct 27, 2018 by tseemann
@simonrharris
1
ska distance - include distance.phy PHYLIP too? enhancement New feature or request
#19 opened Oct 27, 2018 by tseemann
What is XXXXXX_ddl.fa ? question Further information is requested
#18 opened Oct 27, 2018 by tseemann
1
ska type multiple samples at once? enhancement New feature or request
#16 opened Oct 27, 2018 by tseemann
@simonrharris
1
fastq -> READS ; fasta -> CONTIGS ? enhancement New feature or request
#15 opened Oct 27, 2018 by tseemann
1
Improve prediction of number of missed alignments enhancement New feature or request
#10 opened Oct 25, 2018 by simonrharris
@simonrharris
Publish the thing enhancement New feature or request
#6 opened Aug 28, 2018 by bewt85
@simonrharris
3
Less memory for merge and align enhancement New feature or request
#4 opened Aug 28, 2018 by bewt85
2
One command for fasta, fastq and merge enhancement New feature or request
#3 opened Aug 28, 2018 by bewt85
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