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@github-actions github-actions released this 12 Jun 18:12
· 1049 commits to main since this release
v0.19.3

Announcement: scikit-image 0.19.3

We're happy to announce the release of scikit-image v0.19.3!

scikit-image is an image processing toolbox for SciPy that includes algorithms
for segmentation, geometric transformations, color space manipulation,
analysis, filtering, morphology, feature detection, and more.

For more information, examples, and documentation, please visit our website:

https://scikit-image.org

Bugs Fixed

  • Revert unintentional change to default multichannel behavior introduced in v0.19.0 for skimage.restoration.cycle_spin (now defaults to single channel again)
  • Fix corner case with an optimal angle of 0 degrees in hough_line_peaks
  • Fixed the gallery example involving registration with log-polar transformations
  • Update test suite for compatibility with the most recent tifffile release.
  • warp/rotate: fixed a bug with clipping when cval is not in the input range
  • Fix computation of histogram bins for multichannel integer-valued images

General Maintenance

  • Update skimage.future.manual_polygon_segmentation to work with Matplotlib 3.5.
  • Update skimage.io.imread to avoid warnings when using imageio>=2.16.2.
  • Now compatible with Pillow >= 9.1 (palette may contain <256 entries)
  • Added support for NumPy 1.23

Pull Requests Included

  • Backport PR #6306 on branch v0.19.x (Fix for error in 'Using Polar and Log-Polar Transformations for Registration') (#6312)
  • Backport PR #6271 on branch v0.19.x (hough_line_peaks fix for corner case with optimal angle=0) (#6313)
  • Backport PR #6261 on branch v0.19.x (Ignore sparse matrix deprecation warning) (#6316)
  • backport PR 6328: Fix issue with newer versions of matplotlib in manual segmentation (#6334)
  • Backport PR #6343 on branch v0.19.x (avoid warnings about change to v3 API from imageio) (#6344)
  • Backport PR #6355 on branch v0.19.x (remove use of deprecated kwargs from test_tifffile_kwarg_passthrough) (#6357)
  • Backport PR #6352 on branch v0.19.x (Fix channel_axis default for cycle_spin) (#6358)
  • Backport PR #6348 on branch v0.19.x (Fix smoothed image computation when mask is None in canny) (#6359)
  • Backport PR #6361 on branch v0.19.x (Document support for Path objects in io functions) (#6363)
  • Backport PR #6400 on branch v0.19.x (Add support for NumPy 1.23) (#6403)
  • Backport PR #6335 on branch v0.19.x (warp/rotate: fixed a bug with clipping when cval is not in the input range) (#6411)
  • Backport PR #6413 on branch v0.19.x (Fix computation of histogram bins for multichannel integer-valued images) (#6414)

10 authors added to this release [alphabetical by first name or login]

  • Albert Y. Shih
  • Bartłomiej Śmietanka
  • Dave Mellert
  • Gregory Lee
  • Graham Inggs
  • Jarrod Millman
  • John Hagen
  • Mark Harfouche
  • Riadh Fezzani
  • Stefan van der Walt

7 reviewers added to this release [alphabetical by first name or login]

  • Alexandre de Siqueira
  • Gregory Lee
  • Jarrod Millman
  • Juan Nunez-Iglesias
  • Lars Grüter
  • Mark Harfouche
  • Riadh Fezzani