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Ab initio Modelling of Proteins for moLEcular replacement

AMPLE is a pipeline for unconventional Molecular Replacement A full description of the pipeline can be found here.

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Key Features

  • Molecular Replacement using ab initio protein structure predictions
  • Molecular Replacement using single/multiple distant homologous structures
  • Molecular Replacement using NMR ensembles
  • Molecular Replacement using ideal helices
  • Molecular Replacement for coiled-coil proteins
  • Molecular Replacement using models derived from online databases

Examples of the above can be found here.

Command line options

A list of command line options for AMPLE are available here.