Danger
This codebase is deprected and is no maintained/used in its current form.
- Author
Ronak H Shah, Donavan Cheng, Ahmet Zehir, Aijazuddin Syed, Raghu Chandramohan, Meera Prasad et.al
- Contact
- Source code
- Wiki
- License
IMPACT-Pipeline is a Perl/Python/R command-line software toolkit to process data, call somatic aberrations (SNV,INDELS,SV,CNV) generated by NGS based MSK-IMPACT assay. It is designed for use with hybrid capture, including both whole-exome and custom target panels, and short-read sequencing platforms such as Illumina.
For Description/Usage/Help:
Please visit here: IMPACT-Pipeline Wiki
If you use this software in a publication, please cite our paper
for code citation use: