PyHRF: A Python Library for the Analysis of fMRI Data Based on Local Estimation of Hemodynamic Response Function (Notebook)

Repository containing the jupyter notebook that reproduces the results of the manuscript presented at the 15th Python in Science Conference (Scipy 2017).

Dependencies

This notebook only works with python 2.x.x because of the package pyhrf.

Please check the requirements.txt file to know the necessary dependencies. You can install them using the tool pip.

pip install -r requirements.txt

Finally, you need to install SPM for image preprocessing. You can install it using the install_spm12.sh script.

./install_spm12.sh

Run

Please launch jupyter and then select the notebook index.ipynb.

jupyter-notebook