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ENH: Add three new workbench command interfaces #3306

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@a3sha2 a3sha2 commented Feb 21, 2021

I added the following interfaces for workbench

  • wb_command -cifti-correlation
  • wb_command -cifti-parcellate
  • wb_command -cifti-separate

a3sha2 and others added 6 commits February 21, 2021 04:41
add the following nipype interfaces
[x] wb_command  -cifti-correlation
[x] wb_command -cifti-parcellate
[x] "wb_command  -cifti-separate
@effigies effigies changed the title add some new interfaces for cifti ENH: Add three new workbench command interfaces Apr 30, 2021
@effigies effigies modified the milestones: 1.6.0, 1.6.1 Apr 30, 2021
The input cifti file must have a brain models mapping on the chosen
dimension, columns for .ptseries or .dtseries,
>>> cifticorr = CiftiCorrelation()
>>> cifticorr.inputs.in_file = 'sub-01XX_task-rest.ptseries.nii'
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This file needs to exist (but should be empty) in https://github.com/nipy/nipype/tree/master/nipype/testing/data to allow the doctests to work.

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@a3sha2 I'm going to try to make a release in the next couple days. If you want to try to finish this off, I'd love to include it!

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a3sha2 commented May 27, 2021

sorry for delay @effigies, I will fix it this week

@effigies effigies modified the milestones: 1.6.1, future Jun 2, 2021
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a3sha2 commented Jun 8, 2021

@effigies I added test data

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a3sha2 commented Jun 8, 2021

I will work more on test dataset

@effigies effigies mentioned this pull request Oct 15, 2021
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2 participants