Skip to content

Issues: nanoporetech/tombo

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

129 Open 318 Closed
129 Open 318 Closed
Author
Filter by author
Label
Filter by label
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Milestones
Filter by milestone
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Which strand to use in RNA modification?
#456 opened May 24, 2024 by guangzhaocs
Support RNA004 kit in Tombo
#455 opened May 16, 2024 by charlesxu90
3
none correlation between modification position and +/- 1
#454 opened Apr 18, 2024 by DelphIONe
2
Problem importing Tombo in python
#453 opened Mar 6, 2024 by MarioRinBarr
1
Fail to Install tombo using venv3 Ubuntu18.04
#452 opened Feb 26, 2024 by abadouh
1
Cannot install on Mac OS
#451 opened Feb 12, 2024 by edimmick
1
overplot-type doesn't work
#450 opened Jan 16, 2024 by uribertocchi
1
Can't install Tombo under current Ubuntu installation
#449 opened Jan 2, 2024 by jsthv
2
issue when running re-squiggle
#448 opened Dec 14, 2023 by tweedle828
2
Endless running Tombo resuiggle, reached to 100% in resuiggle but doesn't finish the job
#447 opened Dec 7, 2023 by kwonej0617
1
[resquiggle] Most of my reads are unsuccessful bc "extends beyond bandwidth"
#446 opened Nov 27, 2023 by skranz0
2
Will this affect my next analysis
#445 opened Nov 21, 2023 by lanyunxin
2
Unsuccessful resquiggle for RNA
#443 opened Oct 30, 2023 by vgori
4
tombo plot error: Encountered invalid genome sequence request
#442 opened Oct 12, 2023 by xiezhq
Slow Re-squiggle though set --process 40 to run tombo resquiggle over multiple cores
#441 opened Oct 7, 2023 by jouhpf
3
Endless running Tombo resuiggle, reached to 100% in resuiggle but doesn't go to next step, generate output files
#437 opened Jul 13, 2023 by kwonej0617
1
tombo installing error by pip
#434 opened Jun 26, 2023 by gaoxiangcao
1
preprocessing for tombo
#429 opened Apr 12, 2023 by priyanagpal25
2
How is expected fraction abundance calculated? Does it normalize for coverage in treated vs untreated conditions?
#428 opened Apr 4, 2023 by smk5g5
Is there a minimum sequence length/ can resquiggle work with a 38 nt reference?
#426 opened Mar 9, 2023 by zaettu
Instalation issue with python 3.9 and last version of conda
#425 opened Mar 8, 2023 by enriiquee
1
ERROR: 'utf-8' codec can't decode byte 0x8b
#424 opened Mar 6, 2023 by sagnikbanerjee15
4
Problems in starting the analysis. Please help me
#423 opened Feb 20, 2023 by Francinepiubeli
1
tombo preprocess annotate_raw_with_fastqs
#422 opened Feb 14, 2023 by AzlanNI
16
de novo & meme
#421 opened Jan 23, 2023 by sarah872
ProTip! no:milestone will show everything without a milestone.