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SEG 2020 and other idle fixes #405

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SEG 2020 and other idle fixes #405

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maxkazmsft
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@maxkazmsft maxkazmsft commented Aug 3, 2020

Features

  • generation of 3D output in test.py (3D segmentation maps) with geometric and arithmetic feature map averages in inline and crossline directions
  • added generation of segy files for 3D segmentation images: we now have a complete 3D segy input and 3D segy output workflow
  • optimized test image scoring for memory usage (no memory spikes with 3D data)
  • added "memory_profiler" dependency (for optional memory profiling)
  • added segy writers to write segy files based on an existing segy file (for SEG 2020 competition) and based on just a numpy array
  • new BYOD script to process SEG 2020 competition training and testing data

Bugfixes

  • fixed segyviewer instructions in main Readme
  • fixed split ratios in BYOD scripts (correct test1 and test2 splits like in the original Dutch F3 dataset)
  • fixed unet model config file to load the correct UNet module (plain UNet)
  • minor tweaks to documentation and imports

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