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399 Open 770 Closed
399 Open 770 Closed
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Issues list

Migrations: Update adapter to support callback for when a new collection is being processed enhancement New feature or request
#1997 opened May 23, 2024 by eecavanna
1 task
@eecavanna
Update FailureWhereEnum to reflect updated class names berkeley-fy24-refactor Label to describe issues created during the December 2023 hackathon for schema refactor
#1996 opened May 22, 2024 by kheal
@kheal
6
Add PR template documentation Improvements or additions to documentation
#1995 opened May 22, 2024 by kheal
@mslarae13
Add alternative identifiers to WorkflowExeuctionActivity
#1992 opened May 21, 2024 by aclum
1
@aclum
update to enforce including id_version in WorkflowExecutionActivity subclasses
#1988 opened May 17, 2024 by aclum
3 of 6 tasks
1
@sierra-moxon @aclum
@kheal @turbomam
2
berkeley-schema-fy24: Finalize names of Berkeley schema migrators berkeley-fy24-refactor Label to describe issues created during the December 2023 hackathon for schema refactor documentation Improvements or additions to documentation enhancement New feature or request versioning X SMALL Less than 8 hours, less than 1 day
#1983 opened May 16, 2024 by eecavanna
4 tasks
@eecavanna
minimize use of any_of ranges, rules and slot_usages
#1979 opened May 15, 2024 by turbomam
2024 nmdc-schema paper?
#1974 opened May 15, 2024 by turbomam
1
nmdc-schema should not use string_serialization cleanup
#1973 opened May 15, 2024 by turbomam
@sujaypatil96 @turbomam
berkeley-schema-fy24: what are the global expectations for usign the git_url slot?
#1964 opened May 13, 2024 by turbomam
@turbomam @brynnz22
Omit derived files from repo (generate them locally instead) cleanup devops enhancement New feature or request infrastructure not content This issue is about generating output, keeping the repo organized etc.
#1960 opened May 7, 2024 by eecavanna
@eecavanna
Merge nmdc-schema/main branch (base) into berkeley-schema-fy24/main branch (fork)
#1952 opened May 3, 2024 by eecavanna
@turbomam
Master Information class issue
#1947 opened Apr 30, 2024 by turbomam
4 of 7 tasks
13
Factor TextValue out of nmdc-schema and migrate accordingly
#1938 opened Apr 23, 2024 by turbomam
3
Add slots to Biosample class to disambiguate standard MG metadata vs long-read MG metadata
#1937 opened Apr 22, 2024 by pkalita-lbl
@pkalita-lbl
2
Migrations: Add example doctests for functions that use adapter methods enhancement New feature or request
#1929 opened Apr 17, 2024 by eecavanna
@eecavanna
generate prefixmap for nmdc
#1925 opened Apr 15, 2024 by sierra-moxon
1
@sierra-moxon
2
Refactor principal_investigator slot on Study
#1917 opened Apr 9, 2024 by brynnz22
1
QuantityValue.slot_usage.has_numeric_value.range: Float -> Double
#1904 opened Apr 5, 2024 by turbomam
3
fix inconsistent slot_usages
#1901 opened Apr 4, 2024 by turbomam
1 of 11 tasks
@turbomam
1
slot_usage parent issue
#1898 opened Apr 4, 2024 by turbomam
@turbomam
2
Resolve referential integrity exceptions for nmdc:sty-11-547rwq94 Metagenome Omics Processing records
#1897 opened Apr 4, 2024 by mbthornton-lbl
3
linkml-sqldb dump crashes in berkeley-schema-fy24 because of multiple possible Study.part_of paths
#1893 opened Apr 3, 2024 by turbomam
Study.slot_usage.protocol_link should not assert multivalued: true
#1892 opened Apr 3, 2024 by turbomam
@turbomam
2
ensure that the origin of all assets/ files can be determined by Makefile or Python code in the repo or high-quality comments
#1889 opened Apr 2, 2024 by turbomam
@turbomam
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