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34 Open 21 Closed
34 Open 21 Closed
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Issues list

Repeated isomiRs in the mirtop.tsv output
#80 opened Apr 30, 2024 by bounlu
BiopythonDeprecationWarning: Bio.pairwise2 has been deprecated, please consider using Bio.Align.PairwiseAligner
#79 opened Oct 13, 2023 by bounlu
1
Pandas update breaks mirtop stats
#78 opened Apr 25, 2023 by jonahcullen
gff from sRNAbench output - invalid literal error
#77 opened Apr 11, 2023 by jonahcullen
4
Compatible tool - Genozip (compression)
#76 opened Jan 19, 2023 by divonlan
please consider using a contemporary test engine
#75 opened Dec 2, 2022 by emollier
MirTop output changes depending on sample quality
#74 opened Oct 11, 2022 by apeltzer
2
mislabeled isomiR
#73 opened Apr 22, 2022 by abartlett004
wrong addition variants
#69 opened Nov 4, 2021 by lpantano
How to name miRNAs of species not included in miRBase
#68 opened Oct 19, 2020 by zhaosq2022
Empty from sRNAbench output (genome mapped output)
#66 opened Apr 17, 2020 by kicheolkim
4
mirtop stats generates empty txt file bug
#61 opened Oct 10, 2019 by leontienvdbent
5
parsing from sRNAbench data (II) bug
#60 opened Sep 30, 2019 by JFsanchezherrero
@lpantano
3
How can I get files like tagMir-all.gff?
#57 opened Sep 5, 2019 by illumination-k
1
Support sqlite database enhancement internal
#56 opened Aug 22, 2019 by lpantano
3 tasks
@arunhpatil
parsing from sRNAbench data
#53 opened Feb 19, 2019 by lsumoy
10
integrate mirtop into #galaxy enhancement good first issue help wanted
#40 opened Jun 30, 2018 by lpantano
build docker automatically after a version is successfully finished. enhancement help wanted
#39 opened Jun 30, 2018 by lpantano
help with the header of sRNAbench good first issue
#38 opened Jun 29, 2018 by lpantano
Find bugs or unclear man pages in docs good first issue help wanted
#37 opened Jun 29, 2018 by lpantano
cross GFF with SNP information enhancement help wanted internal
#35 opened Apr 18, 2018 by lpantano
Add stats output to multiqc enhancement good first issue help wanted
#33 opened Mar 26, 2018 by lpantano v0.3.0
1
Conda install broken; cannot find python modules
#27 opened Jan 19, 2018 by lsmainzer
3
Function to parse queries and apply to the GFF file good first issue help wanted internal
#23 opened Jan 19, 2018 by lpantano v0.3.0
Implement DESeq2 like normalization good first issue help wanted internal
#22 opened Jan 18, 2018 by lpantano
2
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