GitHub - kjolley/BIGSdb_scripts: Miscellaneous scripts for interacting with BIGSdb databases

kjolley / BIGSdb_scripts Public

Miscellaneous scripts for interacting with BIGSdb databases

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Name		Name	Last commit message	Last commit date
Latest commit History 162 Commits
hicap		hicap
lib		lib
rMLST_tree		rMLST_tree
visualisation_datasets		visualisation_datasets
.perlcriticrc		.perlcriticrc
Ab_blactamase.pl		Ab_blactamase.pl
assemble_and_upload.pl		assemble_and_upload.pl
check_taxonomy.pl		check_taxonomy.pl
clone_loci.pl		clone_loci.pl
emert_stats.pl		emert_stats.pl
extract_rMLST.pl		extract_rMLST.pl
get_defs_from_enterobase.pl		get_defs_from_enterobase.pl
incomplete_MLST.pl		incomplete_MLST.pl
isolate_allele_lengths.pl		isolate_allele_lengths.pl
json_dataset.pl		json_dataset.pl
mendevar.pl		mendevar.pl
migrate_loci.pl		migrate_loci.pl
migrate_tags.pl		migrate_tags.pl
neisseria_genogroups.pl		neisseria_genogroups.pl
populate_Abaumannii_biofilm.pl		populate_Abaumannii_biofilm.pl
populate_Abaumannii_resistance_profile.pl		populate_Abaumannii_resistance_profile.pl
populate_Neisseria_nadA.pl		populate_Neisseria_nadA.pl
populate_peptide_id.pl		populate_peptide_id.pl
profiles_for_eburst.pl		profiles_for_eburst.pl
profiles_with_species.pl		profiles_with_species.pl
pubmlst_download_ecoli.pl		pubmlst_download_ecoli.pl
rMLST_treemap_json.pl		rMLST_treemap_json.pl
rest_check_taxonomy.pl		rest_check_taxonomy.pl
rest_mendevar.pl		rest_mendevar.pl
scan_image.pl		scan_image.pl
site_updates.pl		site_updates.pl
sync_rMLST_scratch.pl		sync_rMLST_scratch.pl
update_bast_with_mendevar.pl		update_bast_with_mendevar.pl
vaccine_protection_prediction.pl		vaccine_protection_prediction.pl
wgMLST_xml.pl		wgMLST_xml.pl
xref_loci.pl		xref_loci.pl