v0.11.4

Added

• Centroid inference for pOTUs based on the midpoint, or balance point, of all cluster members.
• A table summarizing the intra-cluster evolutionary distances ('phylotu_cluster_stats.tsv').
• Automatically removes trailing semicolons from accession2lin and seq2lineage tables.

Fixed

• Estimation of local-alignment distances for a taxonomic rank - now only considers sequences from monophyletic taxa.
• --min_seq_length always overrides the minimum profile HMM proportion threshold in treesapp update.
• Fixed previously unhandled exceptions if reference package training failed during treesapp create

Changed

• The minimum sequence length of 30 (AA) has been removed be default, but can still be used as before with --min_seq_length.
  Results likely will not change as more stringent filtering thresholds were already applied in downstream steps.
• --pc was removed from treesapp create's argument list