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Pinned

  1. GVDB GVDB Public

    Giant Virus Database

    3

  2. viralrecall viralrecall Public

    Detection of NCLDV signatures in 'omic data

    Python 29 11

  3. ncldv_markersearch ncldv_markersearch Public

    A tool for identifying phylogenetic marker genes in Nucleocytoviricota (giant viruses) and generating concatenated alignments.

    Python 8 1

  4. pangenomics pangenomics Public

    Scripts and utilities for pangenomic/phylogenomic analysis of prokaryotic genomes. Scripts for the analysis of genomic features such as C-ARSC, N-ARSC, and intergenic spacer lengths are also includ…

    Python 7 6

  5. lastp_aai lastp_aai Public

    script for calculating pairwise amino acid identity (AAI) between protein files

    Python 6 4

  6. markerfinder markerfinder Public

    scripts for predicting phylogenetic marker genes

    Python 3 1