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Popular repositories

  1. phantasm phantasm Public

    PHANTASM: PHylogenomic ANalyses for the TAxonomy and Systematics of Microbes

    Python 20

  2. primerForge primerForge Public

    software to identify primers that can distinguish genomes

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  3. xenoGI xenoGI Public

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    Code for detecting genomic island insertions in clades of microbes. This fork is used specifically for PHANTASM

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  4. pseudofinder pseudofinder Public

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    Conda recipes for the bioconda channel.

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  6. lyve-SET lyve-SET Public

    Forked from lskatz/lyve-SET

    💃 🌴 LYVE-SET, a method of using hqSNPs to create a phylogeny, especially for outbreak investigations

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