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27 Open 6 Closed
27 Open 6 Closed
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Issues list

sourmash benchmarking
#47 opened Apr 14, 2022 by ctb
3
add acknowledgements and author contributions
#46 opened Jan 30, 2022 by ctb
Figure 5 updates
#40 opened Dec 28, 2021 by ctb
Figure 1 commentary and updates
#39 opened Dec 27, 2021 by ctb
1
more references to include
#37 opened Nov 28, 2021 by ctb
1 of 2 tasks
discussion of taylor's suggestions from #35
#36 opened Nov 28, 2021 by ctb
7 of 9 tasks
add more set-cover references?
#34 opened Nov 7, 2021 by ctb
what is our estimate of the number of total k-mers in genbank?
#30 opened Jan 25, 2021 by ctb
1
figure out the right reference for min-set-cov greedy algorithm
#29 opened Jan 25, 2021 by ctb
(re)visit sourmash issue around Scaled MinHash
#27 opened Jan 10, 2021 by ctb
inspect kssd paper and see if we should reference
#26 opened Jan 10, 2021 by ctb
cross-check discussion of Scaled MinHash with list in sourmash issue
#25 opened Jan 10, 2021 by ctb
cross-check paper with list of sourmash use cases
#24 opened Jan 10, 2021 by ctb
thought: many genomes is annoying.
#23 opened Jan 4, 2021 by ctb
idea: is there value in mentioning min-set-cov as an idea for mappers?
#22 opened Jan 4, 2021 by ctb
1
remember to cite modimizer
#21 opened Jan 3, 2021 by ctb
reviewers to suggest
#20 opened Dec 20, 2020 by ctb
6
reference: On the complexity of haplotyping a microbial community
#19 opened Dec 20, 2020 by ctb
explore david's concerns
#18 opened Dec 2, 2020 by ctb
1
collected items for another paper (on magsearch/etc) or papers
#17 opened Dec 2, 2020 by ctb
1
min-set-cover references for genomics specifically
#16 opened Dec 2, 2020 by ctb
2
how do we show "minimal" or close-to-minimal? how do we measure approximation?
#15 opened Dec 2, 2020 by ctb
1
reference: Nucleotide-resolution bacterial pan-genomics with reference graphs paper
#11 opened Nov 15, 2020 by ctb
leftover text from discussion
#9 opened Oct 28, 2020 by ctb
leftover text from discussion
#8 opened Oct 28, 2020 by ctb
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