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Analyzing clinical decision instruments through the lens of data and large language models.

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csinva/clinical-rule-analysis

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Files

  • notebooks_data_prep: Contains notebooks used to clean and prepare the data
  • notebooks_llm: Contains notebooks used for LLM experiments
  • data: Contains the raw data, processed data, and data dictionary
    • (Optional) Paper pdfs are put into this gdrive folder.
      • Each paper is named using its id
      • If using rclone, download with rclone ls gdrive:data/public_data/mdcalc-papers --drive-shared-with-me
      • To download a single paper, rclone copy gdrive:data/public_data/mdcalc-papers/10129.pdf . --drive-shared-with-me

Working with the CDI Dataset