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27 Open 18 Closed
27 Open 18 Closed
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Issues list

Create Graphs/Analyses without Performing Rarefaction
#57 opened May 30, 2024 by pkirti33
Wiki Example Code Seems Outdated documentation Improvements or additions to documentation
#55 opened May 30, 2024 by DarioS
3
LinDA Unusual p-value Distribution
#54 opened May 29, 2024 by DarioS
MicrobiomeStat::generate_beta_test_single represents errors Not a Bug - Solution Provided This behavior is intentional as part of our design. However, we've provided a solution to accommodat
#52 opened May 17, 2024 by HuaZou
2
Error in midpoint(data.obj$tree) : could not find function "midpoint" Not a Bug - Solution Provided This behavior is intentional as part of our design. However, we've provided a solution to accommodat
#49 opened May 8, 2024 by nutrimol
2
mStat_generate_report_single(): error in linda() call Bug Fixed This bug has been addressed and resolved in the latest update. bug Something isn't working
#48 opened May 6, 2024 by SciLiciumTheo
1
qiime2 style metadata import error Not a Bug - Solution Provided This behavior is intentional as part of our design. However, we've provided a solution to accommodat
#46 opened Apr 27, 2024 by magicprotoss
1
Datatype of feature.tab not matrix after normalization Bug Fixed This bug has been addressed and resolved in the latest update. bug Something isn't working
#45 opened Apr 23, 2024 by pkirti33
6
Problems with MicrobiomeStat.rdb good first issue Good for newcomers
#40 opened Mar 20, 2024 by kuzmpa
4
Error when running generate_beta_trend_test_long() function Bug Fixed This bug has been addressed and resolved in the latest update. bug Something isn't working
#37 opened Mar 7, 2024 by QGaelle
4
Level of factor missing in output generate_alpha_trend_test_long() function. Not a Bug - Solution Provided This behavior is intentional as part of our design. However, we've provided a solution to accommodat
#36 opened Mar 5, 2024 by QGaelle
3
Format time.var in generate_alpha_trend_test_long() function Not a Bug - Solution Provided This behavior is intentional as part of our design. However, we've provided a solution to accommodat
#35 opened Feb 29, 2024 by QGaelle
10
Could not find function "mStat_convert_phyloseq_to_data_obj" By Design This behavior is intentional and is part of the package's design. It's not considered a bug or an is Not a Bug - Solution Provided This behavior is intentional as part of our design. However, we've provided a solution to accommodat
#34 opened Feb 27, 2024 by QGaelle
5
generate_taxa_test_pair() issue with time.var = NULL in random effect By Design This behavior is intentional and is part of the package's design. It's not considered a bug or an is Not a Bug - Solution Provided This behavior is intentional as part of our design. However, we've provided a solution to accommodat
#33 opened Feb 18, 2024 by 16svale
5
handling the false discovery rate ("fdr") By Design This behavior is intentional and is part of the package's design. It's not considered a bug or an is
#32 opened Feb 18, 2024 by 16svale
1
generate_alpha_trend_test_long giving fatal error, aborting R session bug Something isn't working user-environment Issues tagged with this label are suspected to arise from the user's specific environment or setup r
#30 opened Feb 8, 2024 by aherms12
6
Error "contrasts can be applied only to factors with 2 or more levels" while using generate_alpha_change_test_pair() bug Something isn't working Not a Bug - Solution Provided This behavior is intentional as part of our design. However, we've provided a solution to accommodat
#29 opened Feb 6, 2024 by BiggusDickus666
2
Error: number of observations (=44) <= number of random effects (=44) for term (1 + time | subject) By Design This behavior is intentional and is part of the package's design. It's not considered a bug or an is Not a Bug - Solution Provided This behavior is intentional as part of our design. However, we've provided a solution to accommodat
#26 opened Jan 22, 2024 by AlexanderUm
7
microbiomestat ts.levels not plotting correctly in generate_taxa_areaplot_long bug Something isn't working Not a Bug - Solution Provided This behavior is intentional as part of our design. However, we've provided a solution to accommodat
#24 opened Jan 5, 2024 by carmennns2
9
time.var = NULL, in mStat_generate_report_single () causes an error and stops rendering Bug Fixed This bug has been addressed and resolved in the latest update. bug Something isn't working
#23 opened Dec 12, 2023 by RachBioHaz
2
Cannot acces to data with generate_beta_ordination_pair object enhancement New feature or request Not a Bug - Solution Provided This behavior is intentional as part of our design. However, we've provided a solution to accommodat
#22 opened Dec 12, 2023 by ladrub
4
GMPR transformation function is missing bug Something isn't working Not a Bug - Solution Provided This behavior is intentional as part of our design. However, we've provided a solution to accommodat
#20 opened Dec 4, 2023 by thecorz
1
generate_beta_ordination_single: meta_tab not found Bug Fixed This bug has been addressed and resolved in the latest update. bug Something isn't working
#18 opened Nov 14, 2023 by sdoms
1
generate_alpha_change_test_pair(): Error in dplyr::group_by(): ! Must group by variables found in .data. ✖ Column time is not found. Bug Fixed This bug has been addressed and resolved in the latest update. bug Something isn't working
#17 opened Nov 6, 2023 by qqwxp
7
generate_beta_test_single(): Error in colnames<-(*tmp*, value = colnames(lhs)) : attempt to set 'colnames' on an object with less than two dimensions restart-solution Issues tagged with this label are believed to be related to transient or environment-specific glitch user-environment Issues tagged with this label are suspected to arise from the user's specific environment or setup r
#12 opened Sep 18, 2023 by cami3
10
ProTip! Updated in the last three days: updated:>2024-05-30.