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Issues list

[Feature] Smooth Kim meshes enhancement New feature or request
#306 opened May 30, 2024 by alessandrofelder
1
[BUG] Kim developmental atlases fail validation bug Something isn't working
#303 opened May 21, 2024 by viktorpm
1
@viktorpm
Ensure tests do not affect local system when run locally. enhancement New feature or request
#302 opened May 20, 2024 by adamltyson
Move atlas generation code out of the brainglobe-atlasapi package enhancement New feature or request
#295 opened May 16, 2024 by adamltyson
Atlas resolution as an attribute, not a name. enhancement New feature or request
#294 opened May 16, 2024 by adamltyson
Enforce standardised orientation enhancement New feature or request
#293 opened May 16, 2024 by adamltyson
Save atlases to .brainglobe/atlases enhancement New feature or request
#291 opened May 15, 2024 by adamltyson
Standardise the axial resolution of the allen spinal cord atlas enhancement New feature or request
#289 opened May 13, 2024 by adamltyson
1
Use pooch to download data enhancement New feature or request
#284 opened May 10, 2024 by adamltyson
[Feature] flexibly generate atlases with different resolutions enhancement New feature or request
#280 opened May 9, 2024 by alessandrofelder
Add updated version of the kim atlas enhancement New feature or request
#279 opened May 7, 2024 by adamltyson
1
deal with local and remote atlas versions in validate_atlases.py bug Something isn't working enhancement New feature or request
#274 opened May 2, 2024 by viktorpm
@viktorpm
9
Decide what to do with atlas_generation/main_script enhancement New feature or request
#273 opened Apr 30, 2024 by adamltyson
1
[Feature] Add Ambystoma mexicanum (axolotl) atlas enhancement New feature or request new-atlas
#270 opened Apr 19, 2024 by adamltyson
[BUG] Hemisphere map not correctly set for mpin_zfish_1um_v1.0 bug Something isn't working
#268 opened Apr 12, 2024 by PolarBean
@alessandrofelder @viktorpm
2
[Feature] Are there plans for developing an online version of BrainGlobe-atlasapi? enhancement New feature or request
#267 opened Apr 12, 2024 by PolarBean
3
[Feature] Functionality to validate an newly-generated local atlas given a path enhancement New feature or request
#260 opened Mar 26, 2024 by alessandrofelder
@alessandrofelder
[Feature] Adding a cave fish atlas enhancement New feature or request new-atlas
#259 opened Mar 25, 2024 by alessandrofelder
2
Add a a prarie vole atlas? enhancement New feature or request new-atlas
#250 opened Feb 28, 2024 by adamltyson
[Feature] fixtures to mock invalid atlases atlasgen Issue was transferred from the retired bg-atlasgen. Concerns the atlas_generation submodule. enhancement New feature or request
#200 opened Feb 19, 2024 by alessandrofelder
A first pass at regenerating atlases that fail our validation scripts atlasgen Issue was transferred from the retired bg-atlasgen. Concerns the atlas_generation submodule. enhancement New feature or request
#201 opened Feb 12, 2024 by alessandrofelder
4 tasks
@viktorpm
10
[Feature] Make get_local_atlas_version return None for not-available atlases. enhancement New feature or request
#187 opened Dec 20, 2023 by alessandrofelder
Save atlases under .brainglobe/atlases enhancement New feature or request
#184 opened Nov 24, 2023 by adamltyson
1
Support the Gubra "Multimodal 3D Mouse Brain Atlas Framework with the Skull-Derived Coordinate System " atlasgen Issue was transferred from the retired bg-atlasgen. Concerns the atlas_generation submodule. enhancement New feature or request
#203 opened Nov 20, 2023 by adamltyson
Add Princeton RAtlas atlasgen Issue was transferred from the retired bg-atlasgen. Concerns the atlas_generation submodule. enhancement New feature or request new-atlas
#204 opened Nov 20, 2023 by adamltyson
ProTip! Exclude everything labeled bug with -label:bug.