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Cannot locate the output file after running the Samba #321

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Oieswarya opened this issue Apr 25, 2023 · 0 comments

Oieswarya commented Apr 25, 2023

I am running samba with this command :
./samba.sh -r minia_eColi_SR.contigs.fa -q EC_hifi.fa -d asm -t 8

The output log is:
[Tue Apr 25 15:36:03 PDT 2023] Output scaffold sequences in minia_eColi_SR.contigs.fa.scaffolds.fa

But I cannot locate this file. It is not in the current directory. Is there way I can specify the output directory?

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