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Popular repositories

  1. hello-world hello-world Public

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  2. filter_read_depth_10_90 filter_read_depth_10_90 Public

    This shell script takes the middle 80% of sites by read depth. It calculates across all samples in the vcf and then filters sites that fall outside the middle 80th percentile using bcftools

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    Get fourfold degenerate pi from no-gap alignments

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