binQTL.shiny

This is the repository for the Shiny application presented in "binQTL: an R package for QTL mapping with binmap data“ (Yao et al. 2017).

Installation

Launch binQTL.shiny directly from R and GitHub:

Before running the app you will need to have R and RStudio installed (tested with R 3.2.1 and RStudio 0.99.465).
Launch the R console
Please run these lines in R:
- install.packages("shiny")
- install.packages("devtools")
- devtools::install_github("rstudio/shiny-incubator")
Then start the app:
- shiny::runGitHub("binQTL.shiny", "venyao")

Your web browser will open the web app.

Name		Name	Last commit message	Last commit date
Latest commit History 8 Commits
Global.R		Global.R
README.md		README.md
aovQTL.R		aovQTL.R
binQTLScan.R		binQTLScan.R
genoConv.R		genoConv.R
imf2.geno.csv		imf2.geno.csv
imf2.phe.csv		imf2.phe.csv
kinship.R		kinship.R
magic.geno.csv.gz		magic.geno.csv.gz
magic.phe.csv		magic.phe.csv
magicKinship.R		magicKinship.R
magicbinQTL.R		magicbinQTL.R
plotBinmap.R		plotBinmap.R
plotQTL.R		plotQTL.R
randomFunction.R		randomFunction.R
ril.geno.csv		ril.geno.csv
ril.phe.csv		ril.phe.csv
server.R		server.R
ui.R		ui.R